Publications
Lab member names are underlined
“*” indicates equal contributions
2025
He, X., Maruki, T., Morgado-Gamero, W.B., Barrett, R.D.H., Fugère, V., Fussmann G.F., Gonzalez, A., Shapiro, B.J., Cristescu, M.E. (2025). Environmental RNA-Based Metatranscriptomics as a Novel Biomonitoring Tool: A Case Study of Glyphosate-Based Herbicide Effects on Freshwater Eukaryotic Communities. Molecular Ecology. https://doi.org/10.1111/mec.70164. |
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| Ho, W.-Z., Lind, Å.J., Smith, R., Dwyer-Samuel, F., Pilgrim, S., Gear, G., Laing, R., Tomy, G., Mallory, M.L., Enook, J., Zahaby, Y., Provencher J.F., Barrett, R.D.H. (2025) Epigenetic responses to anthropogenic versus natural sources of oil exposure differ in wild Arctic seabird populations. Evolutionary Applications doi.org/10.1111/eva70125. | |
| Fox, J., Reader, S., Guigueno, M.F., Barrett, R.D.H. (2025) Developmental Behavioural Plasticity and DNA Methylation Patterns in Response to Predation Stress in Trinidadian Guppies. Molecular Ecology 0.e:17831. doi.org/10.1111/mec.17831. | |
| Glynn, V.M., Marangoni, L.F., Guglielmetti, M., Tapia, E.R., Ali, V., Quintero, H., Guerra, E.C.R., Yuval, M., Kline, D.I., Leray, M., Connolly, S.R., Barrett, R.D.H. (2025) The role of holobiont composition and environmental history in thermotolerance of Tropical Eastern Pacific corals. Current Biology 35: 1-16.e1-e7. | |
| Fox, J., Reader, S., Barrett, R.D.H. (2025) Rapid neural DNA methylation responses to predation stress in Trinidadian guppies. Molecular Ecology 0:e17774. doi.org/10.1111/mec.17774. | |
| Garcia-Elfring, A., Roffey, H.L., Abergas, J.M., Hendry, A.P., Barrett, R.D.H. (2025) GTP cyclohydolase 1 and axanthism in ball pythons: a new vertebrate model for pterin-based pigmentation. Animal Genetics 56: e70011. https://doi.org/10.1111/age.70011. | |
| Carrión, P.L., Beausoleil, M., Raeymaekers, J.A.M., De León, L.F, Chaves, J.A., Sharpe, D.M.T., Huber, S.K., Herrel, A., Gotanda, K.M., Koop, J.A.H., Knutie, S.A., Clayton, D.H., Podos, J., Barrett, R.D.H., Guichard, F., Hendry, A.P. (2025) Darwin’s finches and climate change: insights from a resilient system. Journal of Evolutionary Biology doi.org/10.1093/jeb/voaf138 | |
| Katkov, E. Gros, M., Fugère, V., Sychterz, A., Tadiri, C.P., Barrett, R.D.H., Cristescu, M., Fussmann, G.F., Gonzalez, A. (2025) Connectivity and nutrient enrichment affect the productivity and stability of aquatic meta-ecosystems. Proceedings of the Royal Society of London B doi.org/10.1098/rspb.2025.1197 | |
| Eckert, L., Eckert, I., Rahn, O., So, C.P., Barrett, R.D.H. (2025) Using herbarium collections to study genetic responses to global change. New Phytologist doi.org/10.1111/nph.70454. | |
| Zhao, J., Luo, M., Merila, J., Barrett, R.D.H., Guo, B., Hu, J. (2025) The interplay between epigenomic and transcriptomic variation in divergence of stickleback ecotypes. BMC Biology 23(1):70. doi.org/10.1186/s12915-025-02176-0. | |
| Xu, C. C. Y., Fugère, V., Barbosa da Costa, N., Beisner, B. E., Bell, G., Cristescu, M. E., Fussmann, G. F., Gonzalez, A., Shapiro, B. J., Barrett, R. D. H. (2025). Pre-exposure to stress reduces loss of community and genetic diversity following severe environmental disturbance. Current Biology. https://doi.org/10.1016/j.cub.2025.01.037 | |
| Loria, A., Tournayre, O., Hébert, M.-P., da Costa, N.B., Fugère, V., Barrett, R.D.H., Beisner, B.E., Gonzalez, A. and Cristescu, M.E. (2025), Estimating Rapid Diversity Changes During Acute Herbicide Contamination Using Environmental DNA. Environmental DNA, 7: e70029. https://doi.org/10.1002/edn3.70029 | |
| Hu, J., Ren, X., Barrett, R.D.H., Samma, E., Sulkowski, M., Brady, S.P. (2025) Alternative splicing and parallel patterns of gene expression underlie population and life history divergence in an amphibian. Ecology and Evolution 15(11): e72481. doi.org/10.1002/ece3.72481 | |
| Garcia-Elfring, A., Roffey, H.L., Abergas, J.M., Hendry, A.P., Tzika, A.C., Barrett, R.D.H. (2025) Ball python colour morphs implicate mc1r in skin color patterning. Pigment Cell and Melanoma Research doi.org/10.1111.pcmr13215. |
2024
| Salamon, M., Astorg, L., Paccard, A., Chain, F., Hendry, A.P., Derry, A.M.*, Barrett, R.D.H.* (2024) Limited migration from physiological refugia constrains the rescue of native gastropods facing an invasive predator. Evolutionary Applications 17(10): e70004. https://doi.org/10.1111/eva.70004 | |
| Derrick, E., Costa, N.B., Barrett, R.D.H., Shapiro, B.J. A glyphosate-based herbicide selects for genetic changes while retaining within-species diversity in a freshwater bacterioplankton community. The ISME Journal submitted. https://www.biorxiv.org/content/10.1101/2024.09.17.613573v1.full.pdf. | |
| Baduel, P., Sammarco, I., Barrett, R.D.H., Coronado-Zamora, M., Crespel, A., Díez-Rodríguez, B., Fox, J., Galanti, D., González, J., Jueterbock, A., Wootton, E., & Harney, E. (2024) The evolutionary consequences of interactions between the epigenome, the genome and the environment. Evolutionary Applications http://dx.doi.org/10.1111/eva.13730 | |
| Fox, J., Toure, M.W., Heckley, A., Raina, F., Reader, S., Barrett, R.D.H. (2024) Insights into adaptive behavioural plasticity from the guppy model system. Proceedings of the Royal Society of London B https://doi.org/10.1098/rspb.2023.2625 | |
| Fox, J., Hunt, D., Hendry, A.P., Chapman, L., Barrett, R.D.H. (2024) Counter-gradient variation contributes to divergence of colonizing populations of fish in varying dissolved oxygen environments. Molecular Ecology http://doi.org/10.1111/mec.17419. | |
| Hendry, A.P., Barrett, R.D.H., Bell, A., Bell, M., Bolnick, D.I., Gotanda, K., Haines, G., Lind, Å., Packer, M., Peichel, C.L., Peterson, C., Poore, H., Massengill, R., McClellan, K., Steinel, N.C., Sanderson, S., Walsh, M., Weber, J.N., Derry, A.M. (2024) Designing eco-evolutionary experiments restoration projects: opportunities and constraints revealed during stickleback introductions. Ecology and Evolution https://doi.org/10.1002/ece3.11503. |
2023
| Beausoleil, M., Carrion-Aviles, P.L., Podos, J., Camacho, C., Richard, R., Lalla, K., Raeymaekers, J.A.M., Knutie, S.A., De Leon, L.F., Huber, S.K., Chaves, J.A., Clayton, D.H., Koop, J.A.H., Sharpe, D., Gotanda, K.M., Barrett, R.D.H., Hendry, A.P. (2023) The fitness landscape of a community of Darwin’s finches. Evolution https://doi.org/10.1093/evolut/qpad160. | |
| Martins, A.R.P., Warren, N., McMillan, W.O., Barrett, R.D.H. (2023) Spatiotemporal dynamics in butterfly hybrid zones. Insect Science 10.1111/1744-7917.13262. | |
| Xu, C.C.Y., Lemoine, J., Albert, A., Mac Whirter, É, Barrett, R.D.H. (2023) Community assembly of the human piercing microbiome. Proceedings of the Royal Society of London B. https://doi.org/10.1098/rspb.2023.1174. | |
| Monchamp, M.-E., Taranu, Z.E., Garner, R.E., Rehill, T., Morissette, O., Iversen, L.L., Fugère, V., Littlefair, J.E., da Costa, N.B., Desforges, J.E., Sánchez Schacht, J.R., Derry, A.M., Cooke, S.J., Barrett, R.D.H., Walsh, D.A., Ragoussis, J., Albert, M., Cristescu, M.E., & Gregory-Eaves, I. (2023). Prioritizing taxa for genetic reference database development to advance inland water conservation. Biological Conservation. https://doi.org/10.1016/j.biocon.2023.109963 | |
| Garcia-Elfring, A., Louchmanov, A.L., Sabin, C.E., Roffey, H.L., Samudra, S.P., Alcala, A.J., Lauderdale, J.D., Hendry, A.P., Menke, D.B., Barrett, R.D.H. (2023) Piebaldism and chromatophore development in reptiles is linked to the tfec gene. Current Biology. https://doi.org/10.1016/j.cub.2023.01.004 |
2022
| Glynn, V.M., Vollmer, S.V., Kline, D.I., Barrett, R.D.H. (2022) Environmental and geographic factors structure cauliflower coral’s algal symbioses across the Indo-Pacific. Journal of Biogeography. https://doi.org/10.1111/jbi.14560 | |
| Hu, J. and Barrett, R.D.H. (2022) Plastic and evolved DNA methylation during parallel adaptation of threespine stickleback (Gasterosteus aculeatus). Molecular Ecology. https://doi.org/10.1111/mec.16832 | |
| Martins, A.R.P., Martins, L.P., Ho, W., McMillan, W.O., Ready, J.S., Barrett, R.D.H. (2022) Scale-dependent environmental effects on phenotypic distributions in Heliconius butterflies. Ecology and Evolution. https://doi.org/10.1002/ece3.9286. | |
| Thurman, T.J., Palmer, T.M., Kolbe, J.J., Askary, A., Daskin, J.H., Gotanda, K.M., LaPierda, O., Kartzinel, T.R., Man in’t Veld, N.A., Revell, L., Wegener, H., Spiller, D.A., Losos, J.B., Pringle, R.M.P., Barrett, R.D.H. (2022) Predicting evolutionary change in response to novel ecological interactions: a field experiment with Anolis lizards. American Naturalist. https://doi.org/10.1086/723209 | |
| Wuitchik, S.J.S., Mogensen, S., Barry, T.N., Paccard, A., Jamniczky, H.A., Barrett, R.D.H.*, Rogers, S.M.* (2022) Evolution of thermal physiology alters the projected range of threespine stickleback under climate change. Molecular Ecology. https://doi.org/10.1111/mec.16396 | |
| Beausoleil, M., Camacho, C., Rabadán-González, J., Richard, R., Lalla, K., Carrion-Aviles, P., Hendry, A.P., Barrett, R.D.H. (2022) Where did the finch go? Insights from radio telemetry of the medium ground finch (Geospiza fortis). Ecology & Evolution. https://doi.org/10.1002/ece3.8768 |
2021
| Xu, C.C.Y., Ramsay, C., Cowan, M., Dehghani, M., Lasko, P., Barrett, R.D.H. (2021) Transgenes of genetically modified animals detected non-invasively via environmental DNA. PLOS ONE 16(8): e0249439. https://doi.org/10.1371/journal.pone.0249439 | |
| Hu, J., Wuitchik, S.J.S., Barry, T., Rogers, S.M., Jamniczky, H.A., Barrett, R.D.H. (2021) Heritability of DNA methylation in threespine stickleback (Gasterosteus aculeatus). Genetics 217: 1-15. | |
| Garcia‐Elfring, A., Paccard, A., Thurman, T.J., Wasserman, B.A., Palkovacs, E.P., Hendry, A.P. and Barrett, R.D.H. (2021), Using seasonal genomic changes to understand historical adaptation to new environments: Parallel selection on stickleback in highly‐variable estuaries. Molecular Ecology. https://doi.org/10.1111/mec.15879. | |
| Hébert, M.-P., Fugère V., Beisner, B.E., Costa N.B., Barrett R.D.H., Bell G., Shapiro B.J., Yargeau V., Gonzalez A., Fussmann G.F. (2021) Widespread agrochemicals differentially affect zooplankton biomass and community structure. Ecological Applications https://doi.org/10.1002/eap.2423 | |
| Costa N.B., Fugère V., Hébert M.-P., Costa N.B., Xu C.C., Barrett R.D.H., Beisner, B.E., Bell G., Fussmann G.F., Yargeau V., Fussmann, G.F., Gonzalez A., Shapiro B.J. (2021). Resistance, resilience, and functional redundancy of freshwater microbial communities facing multiple agricultural stressors in a mesocosm experiment. Molecular Ecology https://doi.org/10.1111/mec.16100. |
2020
| Fugère V., Hébert M.-P., Costa N.B., Xu C.C., Barrett R.D.H., Beisner, B.E., Bell G., Fussmann G.F., Shapiro B.J., Yargeau V., Gonzalez A. (2020) Community rescue in experimental freshwater ecosystems facing severe pesticide pollution. Nature Ecology and Evolution doi.org/10.1038/s41559-020-1134-5. | |
| Stange, M., Barrett, R.D.H., Hendry, A.P. (2020) Genetics and genomics for ecosystem services and nature’s contributions to people. Nature Reviews Genetics https://doi.org/10.1038/s41576-020-00288-7. | |
| Ecosystem size shapes antipredator trait evolution in estuarine threespine stickleback. Wasserman, B.A., Paccard, A., Apgar, T.M., Des Roches, S., Barrett, R.D.H., Hendry, A.P., Palkovacs, E.P. (2020) Oikos https://doi.org/10.1111/oik.07482. |
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